Insertion junction: CLIP2.041592_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041592
Chromosome:chromosome 3
Location:4226270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173750 POB19 Proteome of basal body 19; (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCCTCGTCCCTTCCCTCCCGCTACCTGTCTAGTCTTGCGCTGCATT
Internal bar code:AGCGCATCTTCTCATGGGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1963
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTGAAGAAGTATGCGCG
Suggested primer 2:GCCCTAACCCAACCCTTCTC