Insertion junction: CLIP2.041594_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041594
Chromosome:chromosome 2
Location:6935697
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389060 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCGAACAAATTATCTGGCAGCGGGCGCGGCGGCGCCTGGCAGCCCAC
Internal bar code:TAGATGGCGGCTCGTGTTTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1371
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCGGTGATGATGGGGAC
Suggested primer 2:TGACGGCGATAATGTGAGGG