Insertion junction: CLIP2.041600_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041600
Chromosome:chromosome 7
Location:5433201
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350750 PTO1,PTOX1 (1 of 2) K17893 - ubiquinol oxidase (AOX1, AOX2); Plastid terminal oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCACCACCGGTCTCCCACGCACGGTTCAGCCCTTCGCGGCCCTTCGTA
Internal bar code:TATTGTGTGCACATTGCTCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:308
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TAATGCCCTCGACTCCTCCA
Suggested primer 2:GCAACCCTTCTCTCCAGCAT