Insertion junction: CLIP2.041603_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041603
Chromosome:chromosome 12
Location:1369064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489000 (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAACACGCCAGCGACCCCGGACGCAGCGGCCCCGTAGGCCGCGCCCTG
Internal bar code:AGGTTCGAGGAAGTCGTCAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3356
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGAGTTCAAGTGGACGA
Suggested primer 2:AAGGCGGTTCAGGGTACATG