Insertion junction: CLIP2.041606_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041606
Chromosome:chromosome 16
Location:2247338
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658350 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAGTGCAGTGTAGCGGTCGTACACAGGCGCATATGCAGCGGTGCAAAA
Internal bar code:TCGCTACATGTACTCCATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2847
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCAACCACGTGTCCAAG
Suggested primer 2:ACCAATGACGCCTTCCAGG