Insertion junction: CLIP2.041609_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041609
Chromosome:chromosome 7
Location:1716011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325715 (1 of 29) PF13637 - Ankyrin repeats (many copies) (Ank_4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGGCCCGGACGGCTGGTCGGCGGCTGCGGCCTTGACGTGGTCCTGA
Internal bar code:TGCCCGTTAGACTTTCACGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3754
LEAP-Seq percent confirming:82.7815
LEAP-Seq n confirming:125
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:151

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGGTATACAGGCGGGTG
Suggested primer 2:ACCTGCACATCTCGTTCCAG