Insertion junction: CLIP2.041611_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041611
Chromosome:chromosome 3
Location:5498530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184700 (1 of 1) PTHR31810//PTHR31810:SF6 - FAMILY NOT NAMED // METACASPASE-4-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACTCACACCCGTAGATGTTTTGTTCGGCAGCTCATGCAAGCAAACCAA
Internal bar code:TCGGTCGCGGCATTCTGTAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5457
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGGGATTGGGTTGCTTA
Suggested primer 2:GAGGAGAGGGAAGAGAGGCA