Insertion junction: CLIP2.041612_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041612
Chromosome:chromosome 10
Location:1116200
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425400 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACACGGCCGCATGCAGGCGCCACAACAAGTCCGCTTGTCCTGCTGGTT
Internal bar code:GAAGCACGAAGAGAATTAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1657
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:124
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTCTTTCAAGCGCTTGC
Suggested primer 2:CCTTTCCCGGTGTTCTCCTC