Insertion junction: CLIP2.041614_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041614
Chromosome:chromosome 3
Location:5634137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186100 (1 of 13) IPR005123//IPR006620 - Oxoglutarate/iron-dependent dioxygenase // Prolyl 4-hydroxylase, alpha subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAATACCAGATACCTCACCCTGCCCCGGCTGATGGCCCCCGTACGCT
Internal bar code:TATCCGCTTTAAGTCAGCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1838
LEAP-Seq percent confirming:82.7586
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCAGTTCGTGTGCCATAC
Suggested primer 2:ATTTGGAAGGAGCAGGCCTC