Insertion junction: CLIP2.041615_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041615
Chromosome:chromosome 14
Location:3925127
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g632791 (1 of 1) K10768 - alkylated DNA repair protein alkB homolog 6 (ALKBH6) CDS
Cre14.g632799 ZSP2A (1 of 31) IPR016187 - C-type lectin fold; ZSP2A, hydroxyproline-rich glycoprotein with lectin-like repeats 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGAGAAGGGCGAGGGCTGTGATGGGGTGCACGTGGCAACAAGCACGG
Internal bar code:ATTAACATCCCGTGTATGGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1744
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCATGCACCTGTGTGT
Suggested primer 2:ATCTGTCTGTGTGTGCCCAG