Insertion junction: CLIP2.041625_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041625
Chromosome:chromosome 10
Location:2089473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432950 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCTGGAGCTGGCCCCAGCAGCAGCGCGAAGGTGAGGCGTGCGTGCGG
Internal bar code:AGTGACAGTACTGGGCCCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3166
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGATCCTCCTGCGTTTGT
Suggested primer 2:GATGTCTTTGACCGGGTCGT