Insertion junction: CLIP2.041627_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041627
Chromosome:chromosome 12
Location:3727542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514100 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGACAGTGAGGCTGCAGCGGCCGGACTTCATGGTTTGGGTGAAGAAGG
Internal bar code:AGCCTAGGAGATTAGGGTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5884
LEAP-Seq percent confirming:99.4253
LEAP-Seq n confirming:173
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:174

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGGCGCGAATATCGGAT
Suggested primer 2:TGTACACTGCGTTCCTCACC