Insertion junction: CLIP2.041633_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041633
Chromosome:chromosome 6
Location:3715807
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278158 (1 of 2) IPR001283//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Pistil-specific extensin-like protein // CAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGGAGGAGGAGGGGAAGGAGGAGGCGAGCGCTTGGGAGGCGGGGGCC
Internal bar code:TTGGATTCCGATACGGTACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:114
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACATTTGCACTTCAGCA
Suggested primer 2:GTGCGTGCAGAAACCAACAT