Insertion junction: CLIP2.041635_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041635
Chromosome:chromosome 16
Location:6693872
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCGACGCTTCCGGTGTCGAGCCGGCTCAGCCACATCTTGACGAGCTC
Internal bar code:GACGGTGCCGTCAGCGTCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3105
LEAP-Seq percent confirming:87.3239
LEAP-Seq n confirming:186
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:213

Suggested primers for confirmation by PCR

Suggested primer 1:ATATCACCTGACCGGGGGAA
Suggested primer 2:GTTTGGGAACGTGACAAGGC