Insertion junction: CLIP2.041643_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041643
Chromosome:chromosome 2
Location:1292149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082400 (1 of 2) IPR000104//IPR001394//IPR028889 - Antifreeze protein, type I // Peptidase C19, ubiquitin carboxyl-terminal hydrolase // Ubiquitin specific protease domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTGTGGATGTGTGGATGTGCATGTGACGAGGGACCTGGGCGTTCCTC
Internal bar code:ATTCGTGTGTACAATCCAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3858
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATGCTCTAGTGCTCGAT
Suggested primer 2:GCGATGATCTCAGCAAAGCG