Insertion junction: CLIP2.041643_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041643
Chromosome:chromosome 2
Location:1292150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082400 (1 of 2) IPR000104//IPR001394//IPR028889 - Antifreeze protein, type I // Peptidase C19, ubiquitin carboxyl-terminal hydrolase // Ubiquitin specific protease domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCCCCTCCAGGCGCTTGCCTCCTCCCAGCGCCTTTGTCAGTACCTAG
Internal bar code:ACCTCCATTCGGAGCAACCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4092
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATGATCTCAGCAAAGCG
Suggested primer 2:GCCATGCTCTAGTGCTCGAT