Insertion junction: CLIP2.041661_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041661
Chromosome:chromosome 3
Location:4548699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176200 (1 of 1) PTHR22904//PTHR22904:SF364 - TPR REPEAT CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCCACAGGCGAGCGCAGCAGCGACAGGAAGGCACCGGAGGCTGAGCC
Internal bar code:AACGTCAGATTGGCTTTTATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2028
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGTGGGAGTGCAATCAG
Suggested primer 2:TGCCAATCATTCCCTCCACC