Insertion junction: CLIP2.041666_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041666
Chromosome:chromosome 3
Location:5082414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180200 (1 of 12) IPR001680//IPR015943//IPR017986 - WD40 repeat // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCTCCGCAAGTGCTGTTTATTGCCGAAACAGACCAAAGCGTCACTACC
Internal bar code:ATATTAGTGATACCGCTATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4294
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGGATTCCGGATTTTGC
Suggested primer 2:AGGGTCTGAAGTCGGTCGTA