Insertion junction: CLIP2.041680_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041680
Chromosome:chromosome 7
Location:6359221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357350 GLB1,PII Nitrogen regulatory protein PII; (1 of 1) PTHR30115:SF11 - NITROGEN REGULATORY PROTEIN P-II HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGAAGGGCATGCGTGGCTGTGGTGCCTTGGCGGGAAGTGCCGCACACG
Internal bar code:GACTGCCATAATTGTGCTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:231
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCACTCCCGTTTACACA
Suggested primer 2:CCGTACTTGGACAGGGTGTC