Insertion junction: CLIP2.041687_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041687
Chromosome:chromosome 7
Location:6353147
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357200 UGD1,EZY12 Similar to UDP-Glucose Dehydrogenase; (1 of 3) 1.1.1.22 - UDP-glucose 6-dehydrogenase 3'UTR
Cre07.g357250 protein of unknown function; (1 of 1) PTHR24188//PTHR24188:SF41 - ANKYRIN REPEAT PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGAAGCTCGCTTGAGCCAAGCTCCGCACTCAACATAGCATAGCTGAC
Internal bar code:GCGTAGATTGAAATATAGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1248
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCATCGCAAACACACACA
Suggested primer 2:ATGAGGGTGCAATCCAGGTG