Insertion junction: CLIP2.041688_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041688
Chromosome:chromosome 4
Location:3702192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229163 (1 of 1) PF00169//PF02181 - PH domain (PH) // Formin Homology 2 Domain (FH2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGCACACGGTTGCGCCCCTGACCCAAGCCCCTTTTGGCTCTGGTAC
Internal bar code:TGTGTATGTTAGACCCGACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:189
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCTCGTTCTTTCGTTGG
Suggested primer 2:GGTCGTGGTTCACTTGGGAT