Insertion junction: CLIP2.041696_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041696
Chromosome:chromosome 3
Location:3359780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGATGAGTGGGATTGAGGTGAGTGGGTTCGGAGGCGGGCAGGGGCGGG
Internal bar code:GTACGGCAGCTGTTTGGTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1237
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTTAAGCGGCGGGTCAGAAT
Suggested primer 2:ACAGGGGGTGAGAGGGATAC