Insertion junction: CLIP2.041699_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041699
Chromosome:chromosome 4
Location:3977003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g800503 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCGTCTTCGGGTTGCAGCCAAGTCTAGGCGCGCAGGCGCATAGCAAC
Internal bar code:TAATAAAGAGTCAGTGCTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:522
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTCTGTCTATCGGGGA
Suggested primer 2:GACATGTCCACGGTGGTTCT