Insertion junction: CLIP2.041700_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041700
Chromosome:chromosome 5
Location:2823427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241202 (1 of 3) 3.4.22.53 - Calpain-2 / Milli-calpain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGAAACAGGGGAGACCACCCGCCCGAAGCCCCCAGGCCATGTAACAA
Internal bar code:GATGCGAGTTATGGTTCACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1344
LEAP-Seq percent confirming:26.3158
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTAGGCATCTGCATCCC
Suggested primer 2:CCCCTGTGCCCCTTTAGAAG