Insertion junction: CLIP2.041706_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041706
Chromosome:chromosome 3
Location:5077791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180151 (1 of 4) IPR000225//IPR011989//IPR016024 - Armadillo // Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGGTGAAGGGCGCGATGGAGGGACCGGGGCATGGCGCGGGTGTCGGG
Internal bar code:CATGTGCCATACGTAAGTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1520
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AAACTCCCACCGTCGTTGTT
Suggested primer 2:GTGTGTACCCCATGGAGGTG