Insertion junction: CLIP2.041706_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041706
Chromosome:chromosome 3
Location:5078369
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180151 (1 of 4) IPR000225//IPR011989//IPR016024 - Armadillo // Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGCTCGTACACTTCACACGCACCATGTTGCCGCTCCCTGTGCCACTG
Internal bar code:CATGTGCCATACGTAAGTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:188
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTACCCCATGGAGGTG
Suggested primer 2:AAACTCCCACCGTCGTTGTT