Insertion junction: CLIP2.041712_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041712
Chromosome:chromosome 11
Location:544219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467601 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGTGGAATGACACGTTCCGCTTCAATGTCATCAACGAGAACAACGTG
Internal bar code:ACCCTATGTACAATCCTGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1002
LEAP-Seq percent confirming:17.3913
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGCAGCAATCAATTCGG
Suggested primer 2:CGGTATGTACGCGGCTTTTG