Insertion junction: CLIP2.041712_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041712
Chromosome:chromosome 11
Location:544228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467601 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACACGGGGTTGCGGCCGCCGTCCACGGCCGTGCGCGTGCGGAAGGTC
Internal bar code:ACCCTATGTACAATCCTGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2038
LEAP-Seq percent confirming:64.8649
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTATGTACGCGGCTTTTG
Suggested primer 2:CCTGGCAGCAATCAATTCGG