Insertion junction: CLIP2.041716_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041716
Chromosome:chromosome 1
Location:4836593
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800091 (1 of 1) K18663 - activating signal cointegrator complex subunit 3 [EC:3.6.4.12] (ASCC3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGTTGGGCGCATGCATGCGTCTAACACGTACCCATCTGCCTATACCA
Internal bar code:ATTACCATGTCACAAGGTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:377
LEAP-Seq percent confirming:63.1579
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCGGCGAGTTTCACATC
Suggested primer 2:CCCTAAAAACCCGGCCAGAT