Insertion junction: CLIP2.041717_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041717
Chromosome:chromosome 13
Location:442460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g564850 (1 of 1) PTHR31651:SF3 - AUXIN EFFLUX CARRIER FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATTTGGGTTGTAAATTGCGGGAGCCATCACACAATCACACTCATGCG
Internal bar code:GCAATAACGCTCTAGGTCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:300
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCATTTGTGATAGGTGCG
Suggested primer 2:TGCCGTACATACACCCACAC