Insertion junction: CLIP2.041727_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041727
Chromosome:chromosome 14
Location:2627905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625300 CAX3 (1 of 1) PTHR12266//PTHR12266:SF9 - NA+/CA2+ K+ INDEPENDENT EXCHANGER // CATION/CALCIUM EXCHANGER 3-RELATED; CAX family cation antiporter, membrane protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCACTGCAATGCCACGACGCTGCTTACCTGGCCGGAAGCTCTCTGCG
Internal bar code:CATCAGTTATTTGGTTATTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1636
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTTGGACAACGGAGAGG
Suggested primer 2:GAATTTGCAGGTGGCCACAG