Insertion junction: CLIP2.041728_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041728
Chromosome:chromosome 2
Location:6644802
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389900 HRP4 Hydroxyproline-rich glycoprotein; (1 of 1) PTHR15744//PTHR15744:SF0 - BLOM7 // UPF0469 PROTEIN KIAA0907 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTGCTTGCCGTGAAAATTTAAATCTCACCTCCCGGATTTGGAATGGG
Internal bar code:TGCGATAGGGGTCTTCGTCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2462
LEAP-Seq percent confirming:75.4098
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCTGCATGGGAGATACC
Suggested primer 2:AGCTGACAAGATCAAGGGGC