Insertion junction: CLIP2.041728_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041728
Chromosome:chromosome 2
Location:6644806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389900 HRP4 Hydroxyproline-rich glycoprotein; (1 of 1) PTHR15744//PTHR15744:SF0 - BLOM7 // UPF0469 PROTEIN KIAA0907 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGTACTGACTTATGCGGAGCCCGCCGGGGCCCACACACGCGCGCAAGC
Internal bar code:TGCGATAGGGGTCTTCGTCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:539
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGACAAGATCAAGGGGC
Suggested primer 2:GAGGCTGCATGGGAGATACC