Insertion junction: CLIP2.041736_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041736
Chromosome:chromosome 13
Location:881427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567550 (1 of 1) IPR000719//IPR000817//IPR001245//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Prion protein // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGGTGCAGCAGGAGGAGGGCAGCCGTCAGTAAAGGGATGAAACTCGC
Internal bar code:GAGTACGGGGTTGAAGGGAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:899
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTTGAGGCAGAGCTGGTC
Suggested primer 2:TAACCCCGACTTGACACAGC