Insertion junction: CLIP2.041756_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041756
Chromosome:chromosome 13
Location:4830298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605000 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTACCGAGGTTTTACCGATCAGCCAACCCATACCAATCCTGACCGAT
Internal bar code:GATCTATAAACATCTTATCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1727
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCAATCAAGCAGGCGAG
Suggested primer 2:GTACTTCACCTCGTGCCCAA