Insertion junction: CLIP2.041782_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041782
Chromosome:chromosome 3
Location:3994580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171600 XPP1,XPP Exopolyphosphatase; (1 of 2) K03787 - 5'-nucleotidase (surE) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCTGCTGAGGTGGGTCGATGCACCAGACCCCCGTACCCGAGCCCCCA
Internal bar code:TATGAACAGTAGGTTTCTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:152
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCCTAACCACACGCACA
Suggested primer 2:GCGAAAGGACACTGGACTCA