Insertion junction: CLIP2.041786_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041786
Chromosome:chromosome 1
Location:6189812
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044100 AMYB3,AMB3 Beta-amylase 3; (1 of 3) 3.2.1.2 - Beta-amylase / Saccharogen amylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGCATGGTGCCGGTTGGCACGGCCGCGTCGGCAGTCGTCAACGCGAA
Internal bar code:CTCTCACGCGATTAGTCACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:152
LEAP-Seq percent confirming:7.69231
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCATAGGCACAAAGGACG
Suggested primer 2:CGCTGCCCATTGTATTCTGC