Insertion junction: CLIP2.041795_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041795
Chromosome:chromosome 6
Location:3065558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275000 paralog of LCI36; (1 of 4) K15382 - solute carrier family 50 (sugar transporter) (SLC50A, SWEET) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGGCCTCATCAACATCTACCCCGCAAAGAAGTGAGATAGGGGAGTGTG
Internal bar code:AGACGGTGGAGCTCTTGATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1305
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACAAAGCCGAAACACG
Suggested primer 2:GCAGCTGGTCTCTGGACATT