Insertion junction: CLIP2.041796_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041796
Chromosome:chromosome 8
Location:1665664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g366050 (1 of 13) IPR000086//IPR015797 - NUDIX hydrolase domain // NUDIX hydrolase domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCGCATAAGGGAGCTGGCTGAGGAGCTGGGCGTGTCGGAGGCTGCG
Internal bar code:ATAGGTGGGTGGATAGAGCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:160
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCTGCCATGCTCTTGA
Suggested primer 2:GGCTCCTTTCTAGCACGTGT