Insertion junction: CLIP2.041798_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041798
Chromosome:chromosome 5
Location:2746387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240650 DNJ32 (1 of 1) K09506 - DnaJ homolog subfamily A member 5 (DNAJA5); DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGTAGAAAGAAGTAGTGAAGTTGTAGCCCGGCACAATGTTACAGCAGG
Internal bar code:GTTGAATAATATCTTTTCTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GACCACCGCGATCAGATCAT
Suggested primer 2:GTGTTGTAGATGTCGGCCCA