Insertion junction: CLIP2.041801_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041801
Chromosome:chromosome 8
Location:4120794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383400 SRR11 Scavenger receptor cysteine rich (SRCR) protein; (1 of 2) K13912 - deleted in malignant brain tumors 1 protein (DMBT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAATGGGAATGGATGGGATGGATTGGACTGAAGCATAAGTAGAAGGCA
Internal bar code:GGGACCGTTGCTCGACTTCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2263
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCACCAACACGTCTTCT
Suggested primer 2:GAAGTTGCACGGCGTCATAC