Insertion junction: CLIP2.041805_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041805
Chromosome:chromosome 16
Location:7076106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674852 HAP2,GCS1 (1 of 1) PF10699 - Male gamete fusion factor (HAP2-GCS1); Generative cell specific-1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGAGGGAAGCCTGACAAATGATATAAGTGGGGAGCTTGGGTTGTCGA
Internal bar code:GCAAGGCTCGTCAGACGAGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1108
LEAP-Seq percent confirming:98.5294
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTGTCAAATCGTCGTGT
Suggested primer 2:TGCTTCCATGTTTGTGCTGC