Insertion junction: CLIP2.041806_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041806
Chromosome:chromosome 11
Location:4268249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482101 (1 of 2) IPR016024//IPR019399 - Armadillo-type fold // Parkin co-regulated protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCACGCCCACACACGCACGCAGCGGGCGCTGTTCAAGGGGCTGCTGTG
Internal bar code:GTGTTGAGAAGTAGTAAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:304
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACATACACACAGGGCAGGTG
Suggested primer 2:TCGAGAGAGTGTGGAGAGGG