Insertion junction: CLIP2.041807_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041807
Chromosome:chromosome 2
Location:6722746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387467 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACCCTTGCCGTTTCAGCCCCACACCGCCAAGCACTCCCTAGATTGA
Internal bar code:GATCTGTGCGTAATGAAGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1707
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCTTTTTCCGCTGCTTG
Suggested primer 2:GGGTTGTACTGCGTGGTGTA