Insertion junction: CLIP2.041809_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041809
Chromosome:chromosome 14
Location:2710997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625850 MMP32 Matrix metalloproteinase; (1 of 1) IPR003980//IPR008752 - Histamine H3 receptor // Peptidase M11, gametolysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCGACTGTGTGCGGCAACAGGCCCGGCATCGACATCACGGTGCGTGG
Internal bar code:TGACGTAATGTTATGCGCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:46
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCGTTTTAGCTGGGTT
Suggested primer 2:CACACACACACACACACCAC