Insertion junction: CLIP2.041820_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041820
Chromosome:chromosome 6
Location:5165435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283450 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACGTGGCGGTGTTCGGTGCGGACCAGGCGACGCTGTGCTATCTTCAT
Internal bar code:ATCTTAGAAGTGTTGCGCTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4811
LEAP-Seq percent confirming:97.8261
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCGAAACAGGAGACGTT
Suggested primer 2:TCTGAAGGTTGCAGCTGGAG