Insertion junction: CLIP2.041820_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041820
Chromosome:chromosome 6
Location:5165440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283450 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCTGACCATTCGGATGTCGTCCCACCCTCAGCGGCCTCCGCCAGCCA
Internal bar code:ACTGGCAGACTTACTAGGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5347
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGAAGGTTGCAGCTGGAG
Suggested primer 2:ATGCCGAAACAGGAGACGTT