Insertion junction: CLIP2.041821_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041821
Chromosome:chromosome 7
Location:130037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313000 (1 of 2) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCCCTGCCCACCACACAGCCCGCCACTGCGGCCCTGTTCCCCGCGTC
Internal bar code:AAAGCTAGCTAAATCACGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:387
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCACATCCTACACACAC
Suggested primer 2:GAAGCTCCAAACGCAATGCA