Insertion junction: CLIP2.041822_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041822
Chromosome:chromosome 7
Location:2915709
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332650 NCT1 (1 of 2) PTHR11662:SF3 - INNER MEMBRANE TRANSPORT PROTEIN RHMT; High-affinity nicotinic acid transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTGGAGCACTTGCCTTGCGGTACACCGACGCCGCGGTGATGCTGGGG
Internal bar code:GCGGTCGCAGTCCGGTACTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4838
LEAP-Seq percent confirming:86.5854
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:ATAACGGCTGTCGACTGCAA
Suggested primer 2:CTGTGATGGCTTCGGGACTT