Insertion junction: CLIP2.041823_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041823
Chromosome:chromosome 11
Location:4307427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482483 (1 of 1) K12599 - antiviral helicase SKI2 (SKI2, SKIV2L) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATTTCAATGGAGGGCGGCGGCCAGGGCAGTGGGCCGATGAAACGTCG
Internal bar code:ACTCTTTGATTACGCTTGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:111
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGTTGTAAGTACCAGCC
Suggested primer 2:CACATCTCGGATCAGGTCGG